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Nguyen Cuong, PhD. Collaborating PI Research Interest(s) Genomics Transcriptomics Metagenomics Pharmacogenomics Education BS., University of Science, Vietnam National University Hanoi, HCMC MS., Chungbuk National University, Korea Ph.D., Chungbuk National University, Korea Publications International original publication Chinh Quoc Hoang, Hong‐Quan Duong, Nguyen Thanh Nguyen, Sy Anh Hao Nguyen, Cuong Nguyen, Bo Duy Nguyen, Lan Tuyet Phung, Dung Thuy Nguyen, Chau Thi Minh Pham, Trang Le Doan And Mai Hoang Tran. Clinical evaluation of RB1 genetic testing reveals novel mutations in Vietnamese patients with retinoblastoma. Molecular And Clinical Oncology (2021) 15: 182 Nguyen Si-Tuan, Hua My Ngoc, Le Duy Nhat, Cuong Nguyen, Huy Quang Pham, Nguyen Thuy Huong. Genomic features, whole-genome phylogenetic and comparative genomic T analysis of extreme-drug-resistant ventilator-associated-pneumonia Acinetobacter baumannii strain in a Vietnam hospital. Infection, Genetics and Evolution 80 (2020) 104178   Cuong Nguyen, Jae Kyoung Kim, Seung Kee Han. Robust and Tunable Toggle Switches with Interlocked Positive Feedback Loops. Journal of the Korean Physical Society (2020), Vol. 77, No. 4   Huy Quang Nguyen, Nguyen Thi-Hanh Vu, Ha Hoang Chu, Son Ky Chu,c Ha Hoang, Thanh Trung Tran, Cuong Nguyen, Linh Thi-My Dinh, Hien Thi-Thu Trinh, Tien Quyet Phi. Draft Genome Sequence of Streptomyces cavourensis YBQ59, an Endophytic Producer of Antibiotics Bafilomycin D, Nonactic Acid, Prelactone B, and 5,11-Epoxy-10-Cadinanol, Microbiology resource Announcements (2018), Vol 7:11   Nguyen Si‐Tuan, Hua My Ngoc, Pham Thi Thu Hang, Cuong Nguyen, Pham Hung Van and Nguyen Thuy Huong. New eight genes identified at the clinical multidrug‐resistant Acinetobacter baumannii DMS06669 strain in a Vietnam hospital. Ann Clin Microbiol Antimicrob (2017) 16:74 DOI 10.1186/s12941‐017‐0250‐9   LT-M, Trinh HT-T, Phi TQ. 2018. Draft genome sequence of Streptomyces cavourensis YBQ59, an endophytic producer of antibiotics bafilomycin D, nonactic acid, prelactone B, and 5,11-epoxy-10-cadinanol. Microbiol Resour Announc 7:e01056-18   Hien Trinh, Khoa Truong Nguyen, Lam Van Nguyen, Huy Quang Pham, Can Thu Huong, Tran Dang Xuan, La Hoang Anh, Mario Caccamo, Sarah Ayling, Nguyen Thuy Diep, Khuat Huu Trung, Tran Dang Khanh and Cuong Nguyen. Whole-Genome Characteristics and Polymorphic Analysis of Vietnamese Rice Landraces as a Comprehensive Information Resource for Marker-Assisted Selection. International Journal of Genomics (2017).   Hoang Minh Hien*, Cuong Nguyen*, Huy Quang Pham, Lam Van Nguyen, Truong Nam Hai, Chu Hoang Ha, Lam Dai Nhan et al. Transcriptome sequencing and comparative analysis of Schizochytrium mangrovei PQ6 at different cultivation times. Biotechnology Letters 38, no. 10 (2016): 1781-1789   Cuong Nguyen, Thu Giang Nguyen, Lam Van Nguyen, Huy Quang Pham, Trieu Hai Nguyen, Hoa Thi Pham, Hoa Thi Nguyen et al., De novo assembly and transcriptome characterization of major growth-related genes in various tissues of Penaeus monodon. Aquaculture 464 (2016): 545-553   Thi Huyen Do, Thi Thao Nguyen, Thanh Ngoc Nguyen, Quynh Giang Le, Cuong Nguyen, Keitarou Kimura, Nam Hai Truong. Mining biomass-degrading genes through Illumina-based de novo sequencing and metagenomic analysis of free-living bacteria in the gut of the lower termite Coptotermes gestroi harvested in Vietnam.  Journal of Bioscience and Bioengineering 2014   Cuong Nguyen and Seung Kee Han. Synchronization of toggle switches coupled through a common inhibitor. EPL 90 10010, 2010   Cuong Nguyen and Seung Kee Han. Dynamic Analysis of Interlocked Positive Feedback Loops. J. Korean Phys. Soc., 2008. 53:3460-3467   Cuong Nguyen, Doan Lan Pham, Chang No Yoon, Hak-Yong Kim, Seung Kee Han. Positional Co-Regulation of Transcription Factors in Saccharomyces Cerevisiae. J. Korean Phys. Soc., 2007. 50: 332-336 Domestic original publications Lam Nguyen, Xuan Thi Trinh, Hien Trinh, Dang Hung Tran, Cuong Nguyen. BWTaligner: a genome short-read aligner. Vietnam Journal of Science, Technology and engineering, Vol 60 number 2, June 2018   Hoàng Quốc Huy, Trịnh Thị Xuân, Phạm Quang Huy, Nguyễn Văn Lâm, Trần Công Hoàng, Vũ Thị Bích Hường, Lê Quang Tường, Hoàng Thị Hồng, Bạch Quốc Khánh, Nguyễn Anh Trí, Dương Quốc Chính, Nguyễn Cường. Nghiên cứu ứng dụng Tin sinh học xác định biến dị di truyền trên bệnh nhân bệnh bạch cầu dòng tủy mạn tính. Tạp chí Khoa học Công nghệ Việt Nam B: 14(3), 201   Nguyễn Hải Bằng, Phạm Quang Huy, Trần Xuân Thạch, Nguyễn Giang Thu, Nguyễn Thị Minh Thanh, Nguyễn Thị Hoa, Hà Thị Thu, Nguyễn Thị Tuyết Nhung, Nguyễn Cường, Nguyễn Hữu Ninh, Đồng Văn Quyền, Chu Hoàng Hà, Đinh Duy Kháng. Phân tích hệ phiên mã và sàng lọc một số gen giả định liên quan tới tính trạng tăng trưởng ở tôm sú (Penaeus monodon)”. Tạp chí Công nghệ sinh học: 15(2): 1-10, 2017   Nguyễn Văn Lâm, Phạm Quang Huy, Nguyễn Quốc Đại, Hoàng Minh Hiền, Đặng Diễm Hồng, Lê Văn Sơn, Chu Hoàng Hà, Trương Nam Hải, Nguyễn Cường. Lắp ráp và chú giải hệ gen vi tảo biển dị dưỡng Schizochytrium mangrovei PQ6 của Việt Nam. Tạp chí Khoa học và Công nghệ Việt Nam 2(6B): 37-41, 2015   Nguyễn Cường, Phạm Quang Huy, Nguyễn Văn Lâm, Hà Thị Thu, Phạm Thị Hoa, Nguyễn Hải Triều, Đậu Huy Tùng, Nguyễn Giang Thu, Nguyễn Hữu Ninh, Đồng Văn Quyền, Chu Hoàng Hà, Đinh Duy Kháng. Lắp ráp, chú giải và phân tích hệ phiên mã tôm sú Penaeus monodon. Tạp chí Nghề cá sông Cửu Long 6/2015   Nguyễn Giang Thu, Nguyễn Hải Triều, Phạm Thị Hoa, Nguyễn Thị Hoa, Hà Thị Thu, Đậu Huy Tùng, Vũ Thị Hiền, Nguyễn Thị Tuyết Nhung, Nguyễn Văn Lâm, Phạm Quang Huy, Nguyễn Cường, Nguyễn Hữu Ninh, Nguyễn Lê Anh, Trần Quốc Quân, Cao Tiến Dũng, Đồng Văn Quyền, Chu Hoàng Hà, Đinh Duy Kháng. Giải trình tự và lắp ráp de novo hệ phiên mã tôm sú (Penaeus monodon). Tạp chí Công nghệ Sinh học 13(2A): 417-422, 2015   Nguyễn Văn Lâm, Nguyễn Hà Linh, Nguyễn Văn Tụng, Nguyễn Lê Anh, Nguyễn Quang Vinh, Nguyễn Cường. Phân tích đa hình đơn nucleotide hệ gen vi khuẩn lao Việt Nam với công nghệ giải trình tự thế hệ mới. Tạp chí Công nghệ Sinh học (1): 1-7, 2015   Cuong Nguyen, Hoang Do Thanh Tung, Trinh Thi Xuan. Flexible controllability of interlocked feedback loops in biological systems. Journal of science of HNUEFIT., 2013, 10:176-189   Cuong Nguyen and Seung Kee Han. Dynamic Analysis of Cell Cycle Regulation: Dynamic Modules Composed of Feedback Loops.

Associate Professor  Nguyen Bao Quoc, PhD. Collaborating PI Research Interest(s) Biological and Environmental Sciences Pathology and molecular diagnostics Molecular indicators Education 1995-2000: BSc., Ho Chi Minh City University of Agriculture and Forestry, Vietnam 2003-2005: MSc., Kobe University, Japan 2005-2008: PhD., Kobe University, Japan Publications Books and book chapters 1. M.K. Widana Gamage, Nguyen Ngoc Bao chau, Nguyen Bao Quoc, Saman Abeysinghe and Ajay Kumar Tiwari (2022) Novel methods of phytoplasma detection of phytoplasma in Asian countries. In book “Phytoplasma Diseases in Asian countries: Characterization, Epidemiology, and Management Vol 3”, AP, UK. pp 11-19  https://doi.org/10.1016/B978-0-323-91671-4.00009-5.  ISBN: 978-0-323-91671-4   2. Malyaj R Prajapati, Aakansha Manav, Jitender Singh, Koushlesh Ranjan, A.K.Tiwari, Nguyen Bao Quoc (2022) Viral metagenomics for the analysis of the Begomovirus genome. In book “Geminivirus: Detection, Diagnosis and Management” Academic Press. pp43-56 https://doi.org/10.1016/B978-0-323-90587-9.00011-0 ISBN: 978-0-323-90587-9   3. Nguyen Bao Quoc*, Nguyen Ngoc Bao Chau, Cao Anh Duong (2021) Sugarcane white leaf and grassy shoot management for healthy seed production in Vietnam. In book “Advances in Seed Production and Management” Springer, Singapore pp. 79-89. https://doi.org/10.1007/978-981-15-4198-8_4 ISBN: 978-981-15-4198-8   4. Montip Gettayacamin, Richard Grant, Holl Davun, John E. Heidrich, Sorn San, Yasmina Arditi Paramastri, Imelda Liunanita Winoto, Dondin Sajuthi, Goh Yong Meng, Abdul Rahim Mutalib, Ranillo Rodrigo G. Resuello, Maria Amelita C. Estacio, Joel Villa Tuplano, Hon Mun Wong, Cheryl Inguito Daludado, Pattamarat Kunjara, Jade Donavanik, Pradon Chatikavanij, Chumpol Pholpramool, Nguyen Bao Quoc, Nguyen Ba Tiep (2018) Laws, regulations, guidelines and principles pertaining to laboratory animals in Southeast Asia. In Laboratory Animals: Regulations and Recommendations for Global Collaborative Research. Eds. Eds. Timothy Bennett and Javier Guillen. Elsevier. pp 319-373 https://doi.org/10.1016/B978-0-12-397856-1.00011-8 ISBN: 978-0-12-397856-1   5. Greet Blom-Zandstra, Martina Nardelli, Nguyen Duc Xuan Chuong, Vu Thi Thu Hien, Nguyen Bao Quoc, Nguyen Thi Viet Ha, Gerard van der Linden, Jan Verhagen (2018) A flora of agricultural and horticultural crops: a quick scan of selected crops in the Mekong Delta. Wageningen Research Report. WPR-688. Doi: 10.18174/444768   6. Quoc Bao Nguyen* and Hitoshi Nakayashiki. (2014) RNA silencing in filamentous fungi: from basic to applications. In Genetic Transformation systems in fungi. Eds. Marco van den Berg and Karunakaran Maruthachalam. Springer Publishers. pp. 107-124 http://doi.org/10.1007/978-3-319-10503-1.8 ISBN: 978-3-319-10502-4   7. Nguyễn Bằng Phi, Nguyễn Ngọc Bảo Châu, Nguyễn Bảo Quốc (2017) Vai trò của microRNA trong tính kháng bệnh của cây trồng: tiềm năng và ứng dụng. Chương sách số 17. Trong sách Bệnh hại cây trồng Việt Nam. pp: 570-599. ISBN: 978-604-924-334-9 International original publication Nguyen Thi Kim Thoa, Doan Thi Hong Mai, Brui Long Hiu, Cao Anh Duong, Nguyen    Ngoc Bao Chau, Nguyen Mai Nghiep, Nguyen Van Minh, Nguyen Bao Quoc* (2022) Roles of β-Indole Acetic Acid (IAA) Producing Endophytic Bacteria on the Recovery of Plant Growth and Survival Ability of Sugarcane Infected White Leaf Disease (SWLD). Current Microbiology 79:389. https://doi.org/10.1007/s00284-022-03091-1. Dang Thi Kim Xuan, Nguyen Thien Quang, Nguyen Hoang Minh Khang, Hoang Ngoc xuan Mai, Duong Doan Minh Trung, Nguyen Ngoc Bao Chau, Nguyen Phuong Thao, Nguyen Bao Quoc* (2022) Molecular chatacterization of coconut (Cocos nucifera I.) varieties in Vietnam using sequence-related amplified polymorphism (SRAP) markers. Biologia 77:3087-3097 https://doi.org/10.1007/s11756-022-01136-1  Vo Hoang Xuan Dat, Bui Thi Huyen Nhung, Nguyen Ngoc Bao Chau, Pham Hung Cuong, Vo Duc Hieu, Nguyen Thi Minh Linh, Nguyen Bao Quoc* (2022) Identification of potential microRNA groups for the diagnosis of hepatocellular carcinoma (HCC) using microarray datasets and bioinformatics tools. Heliyon. 8(2): e08987. https://doi.org/10.1016/j.heliyon.2022.e08987  Kien Xuan Ngo*#, Phuong Doan N. Nguyen, Hirotoshi Furusho, Makoto Miyata, Tomomi Shimonaka, Nguyen Ngoc Bao Chau, Nguyen Phuong Vinh, Nguyen Anh Nghia, Tareg Omer Mohammed, Takehiko Ichikawa, Noriyuki Kodera, Hiroki Konno, Takeshi Fukuma, Nguyen Bao Quoc*# (2022) Unraveling the host-selective toxic interaction of cassiicolin with lipid membranes and its cytotoxicity. Phytopathology 112(7): 1524-1536. https://doi.org/10.1094/PHYTO-09-21-0397-R  Nguyen Ngoc Bao Chau, Nguyen Van Minh, Nguyen Mai Nghiep, Nguyen Phuong Vinh, Nguyen Anh Nghia, Nguyen Bao Quoc (2022) Identification and virulence evaluation of cassiicolin-encoding gene of Corynespora cassiicola isolates from rubber tree in Vietnam. Tropical Plant Pathology. 47(3): 378-385 https://doi.org/10.1007/s40858-021-00470-0. Nguyen Bang Phi, Nguyen Doan Nguyen Phuong, Vo Hoang Xuan Dat, Nguyen Ngoc Bao Chau, Nguyen Bao Quoc (2021) Expression profiles of OsNramp6 transcript variants involving in M.oryzae resistance and non-resistance of Vietnamese rice cultivars. European Journal of Plant Pathology. https://doi.org/10.1007/s10658-021-02375-9 Kien Xuan Ngo, Conrad Weichbrodt, Nguyen Bao Quoc (2021) Electroformation of giant Unilamellar Vesicles and A Case Study of the Specific Host-Toxin Interaction of Lipid Membranes with Cassiicolin. Bio-protocol. https://bio-protocol.org/prep1167 Nguyen Bao Quoc, Nguyen Viet Ngoc Hanh, Ho Thi Thu Trang, Pham The Hai, Nguyen Thi Thu Thuy, Nguyen Ngoc Bao Chau (2021) PCR-DGGE Analysis for Identification of Intestinal Bacteria in the Black Soldier Fly Larvae, Hermetia Illucens. African Entomology 29(2):491-498 https://doi.org/10.4001/003.029.0491 Nguyen Hoang Minh Khang, Nguyen Thien Quang, Hoang Ngoc Xuan Mai, Nguyen Doan    Nguyen Phuong, Nguyen Phuong Thao, Nguyen Bao Quoc (2021) Genetic characterization of coconut varieties being conserved in Vietnam through SCoT marker-based polymorphisms. Genetic Resources and Crop Evolution. 69: 385-398  https://doi.org/10.1007/s10722-021-01237-x Nguyen Vu Phong, Tran Bao Thang, Nguyen Thi Ngoc Loan, Nguyen Thanh Phong, Bien Thi Lan Thanh, Ton Bao Linh, Le Hong Thuy Tien, Huynh Van Biet, Nguyen Bao Quoc, Le Dinh Don, Bellafiore Stéphane (2021) The Response of Rice Varieties to Root-Knot Nematode from the Mekong Delta, Vietnam. Nematology. 23(10), 1153-1170 https://doi.org/10.1163/15685411-bja10102 Nguyen Ngoc Bao Chau, Nguyen Quynh Phuong Anh, Le Thuy To Nhu, Nguyen Thi Phung Kieu, Nguyen Bao Quoc (2021) Ant and silkworm pupae as convenient diets for the development and reproduction of big eyed bug Geocoris ochropterus (Hemiptera:Geocoridae). Journal of Asia-Pacific Entomology 24(2):131-134. https://doi.org/10.1016/j.aspen.2021.03.006 Nguyen Bao Quoc*, Nguyen Thi Thanh Xuan, Nguyen Doan Nguyen Phuong, Ho Thi Thu Trang, Nguyen Ngoc Bao chau, Cao Anh Duong, Matthew Dickinson (2021) Development of loop mediated isothermal amplification assays for the detection of sugarcane white leaf disease. Physiological and Molecular Plant Pathology. 113: 101-595. https://doi.org/10.1016/j.pmpp.2020.101595 Nguyen Bao Quoc*, Nguyen Thi Thanh Xuan, Nguyen Mai Nghiep, Nguyen Doan Nguyen Phuong, Ton Bao Linh, Nguyen Ngoc Bao Chau, Nguyen Duc Xuan Chuong, Nguyen Chau Nien, Matthew Dickinson (2021) Loop-mediated isothermal amplification (LAMP) assay for detection of

Nguyen Phuoc Vinh, PhD Collaborating PI Research Interest(s) Pharmacology Pharmaceutical industry Application of nanotechnology in the development of new drug forms Education BS., Ho Chi Minh City Medicine and Pharmacy University, Vietnam MS., Paris-Saclay University, Paris, France Ph.D., Tours University, Tours, France Publications Phuoc Vinh Nguyen, Katel Hervé-Aubert, Laurie Lajoie, Yoann Misericordia, Igor Chourpa, Stéphanie David, Emilie Allard-Vannier; In vitro synergistic activity of cisplatin and EGFR-targeted nanomedicine of anti-Bcl-xL siRNA in a non-small lung cancer cell line model, International Journal of Pharmaceutics: X (2022), Volume 4,2022,https://doi.org/10.1016/j.ijpx.2022.100139. Nguyen, P.-V.; Allard-Vannier, E.; Aubrey, N.; Labrugère-Sarroste, C.; Chourpa, I.; Sobilo, J.; Le Pape, A.; Hervé-Aubert, K. Radiolabeling, Quality Control and In Vivo Imaging of Multimodal Targeted Nanomedicines. Pharmaceutics 2022, 14, 2679. https://doi.org/10.3390/pharmaceutics14122679 Nguyen, P.V.; Aubry, C.; Boudaoud, N.; Gaubert, A.; Langlois, M.-H.; Marchivie, M.; Gaudin, K.; Arpin, C.; Barthélémy, P.; Kauss, T. Oligonucleotide Solid Nucleolipid Nanoparticles against Antibiotic Resistance of ESBL-Producing Bacteria. Pharmaceutics (2022), 14, 299. Nguyen PV, Hervé-Aubert K, Chourpa I, Allard-Vannier E. Active targeting strategy in nanomedicines using anti-EGFR ligands – A promising approach for cancer therapy and diagnosis. Int J Pharm. 2021 Nov 20;609:121134. Nguyen PV, Allard-Vannier E, Chourpa I, Hervé-Aubert K. Nanomedicines functionalized with anti-EGFR ligands for active targeting in cancer therapy: Biological strategy, design and quality control. Int J Pharm. 2021 Aug 10; 605:120795 Nguyen PV, Hervé-Aubert K, David S, Lautram N, Passirani C, Chourpa I, Aubrey N, Allard-Vannier E. Targeted nanomedicine with anti-EGFR scFv for siRNA delivery into triple negative breast cancer cells. Eur J Pharm Biopharm. 2020 Dec;157:74-84. Kauss T., Corinne A., Léa B., Nguyen P.V., Brune V., Sebastien B., and Philippe B. Lipid Oligonucleotides as a New Strategy for Tackling the Antibiotic Resistance. Scientific Reports, 2020, 10 (1): 1054. Awards 2022: Excellent Award of  Pharmaceutics, Prize of the French Academy of Pharmacology  2022: First prize in the 21st Youth Science and Technology Conference in the Health Industry, given by Vietnam’s Ministry of Health and the Central Executive Board of Ho Chi Minh Communist Youth Union